Tutorial.2nd.mineral.physics
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Tutorial: Molecular dynamics | Tutorial: Molecular dynamics | ||
+ | |||
+ | Visualization tools: | ||
+ | |||
+ | 1. JMOL: an open-source Java viewer for chemical structures in 3D | ||
+ | |||
+ | jmol address: | ||
+ | http://jmol.sourceforge.net/ | ||
+ | |||
+ | jmol download: | ||
+ | http://sourceforge.net/projects/jmol/files/latest/download?source=files | ||
+ | |||
+ | 2. Example 1: Snapshot of Fe3C run | ||
+ | |||
+ | 3. VMD: visual molecular dynamics | ||
+ | |||
+ | address: | ||
+ | http://www.ks.uiuc.edu/Research/vmd/ | ||
+ | |||
+ | Download: | ||
+ | http://www.ks.uiuc.edu/Development/Download/download.cgi?PackageName=VMD | ||
+ | |||
+ | 4. Example 2: C in forsterite melt at mid-mantle conditions. |
Revision as of 08:08, 25 July 2012
Tutorial: Molecular dynamics
Visualization tools:
1. JMOL: an open-source Java viewer for chemical structures in 3D
jmol address: http://jmol.sourceforge.net/
jmol download: http://sourceforge.net/projects/jmol/files/latest/download?source=files
2. Example 1: Snapshot of Fe3C run
3. VMD: visual molecular dynamics
address: http://www.ks.uiuc.edu/Research/vmd/
Download: http://www.ks.uiuc.edu/Development/Download/download.cgi?PackageName=VMD
4. Example 2: C in forsterite melt at mid-mantle conditions.