Tutorial.2nd.mineral.physics
From CIDER
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Tutorial: Molecular dynamics | Tutorial: Molecular dynamics | ||
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+ | Tutorial Presentation [[media:tutorial.2nd.mineral.physics.pptx | slides]] | ||
Visualization tools: | Visualization tools: |
Revision as of 04:25, 26 July 2012
Tutorial: Molecular dynamics
Tutorial Presentation slides
Visualization tools:
1. JMOL: an open-source Java viewer for chemical structures in 3D
jmol address:
jmol download:
http://sourceforge.net/projects/jmol/files/latest/download?source=files
2. Example 1: Snapshot of Fe3C run
file @ http://perso.ens-lyon.fr/razvan.caracas/tutorial-cider/mdfe3c.xyz
3. VMD: visual molecular dynamics
address:
http://www.ks.uiuc.edu/Research/vmd/
Download:
http://www.ks.uiuc.edu/Development/Download/download.cgi?PackageName=VMD
4. Example 2: C in forsterite melt at mid-mantle conditions. files @
http://perso.ens-lyon.fr/razvan.caracas/tutorial-cider/a21-C.xyz.gz
http://perso.ens-lyon.fr/razvan.caracas/tutorial-cider/a21-CO2.xyz.gz